Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 KRT18P16-201ENST00000510337 1294 ntBASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 AL355075.4-201ENST00000554988 638 ntBASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 AP003071.4-201ENST00000562276 1284 ntBASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 C1QL1P1-201ENST00000568105 661 ntBASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 AC073912.3-201ENST00000624414 853 ntBASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TUBA1CQ9BQE3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 TUBB8P6-201ENST00000436895 1288 ntBASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 BX088651.1-201ENST00000540551 451 ntBASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 CR392000.1-201ENST00000624770 1228 ntBASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 AC099398.1-201ENST00000567919 2776 ntBASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBA1CQ9BQE3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 KSR1P1-201ENST00000446298 240 ntBASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 AL162741.1-201ENST00000565563 1558 ntBASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBA1CQ9BQE3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 AC012313.1-201ENST00000593393 3059 ntBASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms