Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 PCED1CP-201ENST00000419887 785 ntBASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 PVRIG2P-201ENST00000435460 978 ntBASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 AL136038.4-201ENST00000603606 1261 ntBASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 AL358472.4-201ENST00000633140 710 ntBASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 KRT8P50-201ENST00000562022 1438 ntBASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDK5RAP1Q96SZ6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 HLA-F-220ENST00000434407 884 ntBASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 IER3-202ENST00000376377 1350 ntBASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.29■□□□□ 0.68
CDK5RAP1Q96SZ6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 AC005332.1-201ENST00000577698 1310 ntBASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 AC092597.1-201ENST00000487352 616 ntBASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK5RAP1Q96SZ6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 AL391807.1-203ENST00000604392 2365 ntBASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 AC116407.4-201ENST00000623319 1061 ntBASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDK5RAP1Q96SZ6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDK5RAP1Q96SZ6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CDK5RAP1Q96SZ6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.27■□□□□ 0.67
CDK5RAP1Q96SZ6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDK5RAP1Q96SZ6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CDK5RAP1Q96SZ6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDK5RAP1Q96SZ6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDK5RAP1Q96SZ6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDK5RAP1Q96SZ6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.27■□□□□ 0.67
CDK5RAP1Q96SZ6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms