Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NSMCE2Q96MF7 AC112777.1-201ENST00000540175 1423 ntBASIC17.58■□□□□ 0.41
NSMCE2Q96MF7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 HLA-A-209ENST00000638375 975 ntBASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 AC138028.4-201ENST00000564984 1845 ntBASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NSMCE2Q96MF7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 AC093677.2-201ENST00000600169 1863 ntBASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NSMCE2Q96MF7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 MIR663A-201ENST00000385250 93 ntBASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 PNMA6B-201ENST00000538162 1200 ntBASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 AC080038.1-201ENST00000611274 1154 ntBASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 AC073111.5-205ENST00000641717 521 ntBASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NSMCE2Q96MF7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms