Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 KRASP1-201ENST00000407852 552 ntBASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 AC008040.2-201ENST00000461049 708 ntBASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHAMP1Q96JM3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 RNA5SP413-201ENST00000516373 109 ntBASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 AP003097.1-201ENST00000530657 1135 ntBASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHAMP1Q96JM3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.58■■□□□ 1.04
CHAMP1Q96JM3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHAMP1Q96JM3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.04
CHAMP1Q96JM3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHAMP1Q96JM3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHAMP1Q96JM3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHAMP1Q96JM3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.58■■□□□ 1.04
CHAMP1Q96JM3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHAMP1Q96JM3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.58■■□□□ 1.04
CHAMP1Q96JM3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
CHAMP1Q96JM3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 PCDHA12-202ENST00000613593 2588 ntBASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CHAMP1Q96JM3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 KRT18P29-201ENST00000397031 1267 ntBASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 AC004980.1-204ENST00000429707 299 ntBASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 AP006294.2-201ENST00000641667 209 ntBASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 AC008556.1-201ENST00000610908 2040 ntBASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 PP12613-201ENST00000424958 2230 ntBASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.56■■□□□ 1.04
CHAMP1Q96JM3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHAMP1Q96JM3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms