Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 AP003041.3-201ENST00000527151 707 ntBASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 WWOX-216ENST00000569818 525 ntBASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCPIP1Q96JH7 KRT8P50-201ENST00000562022 1438 ntBASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 HOXB1-202ENST00000577092 1414 ntBASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 KRT18P21-201ENST00000515767 1272 ntBASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 BX088651.1-201ENST00000540551 451 ntBASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 C2orf69P3-201ENST00000565542 1120 ntBASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 AC116562.4-202ENST00000641738 218 ntBASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCPIP1Q96JH7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 AC036111.1-201ENST00000533973 1582 ntBASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCPIP1Q96JH7 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 AL355075.4-201ENST00000554988 638 ntBASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 AC010653.2-201ENST00000623505 997 ntBASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VCPIP1Q96JH7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VCPIP1Q96JH7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
VCPIP1Q96JH7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.57■□□□□ 0.72
VCPIP1Q96JH7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VCPIP1Q96JH7 TSPY14P-201ENST00000303979 915 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms