Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RTP4Q96DX8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19■□□□□ 0.63
RTP4Q96DX8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19■□□□□ 0.63
RTP4Q96DX8 AC034236.2-201ENST00000606662 1610 ntBASIC19■□□□□ 0.63
RTP4Q96DX8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19■□□□□ 0.63
RTP4Q96DX8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RTP4Q96DX8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.99■□□□□ 0.63
RTP4Q96DX8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.99■□□□□ 0.63
RTP4Q96DX8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.99■□□□□ 0.63
RTP4Q96DX8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.99■□□□□ 0.63
RTP4Q96DX8 AP003071.4-201ENST00000562276 1284 ntBASIC18.99■□□□□ 0.63
RTP4Q96DX8 MIR4674-201ENST00000582457 87 ntBASIC18.99■□□□□ 0.63
RTP4Q96DX8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
RTP4Q96DX8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.99■□□□□ 0.63
RTP4Q96DX8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RTP4Q96DX8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RTP4Q96DX8 KRT8P50-201ENST00000562022 1438 ntBASIC18.99■□□□□ 0.63
RTP4Q96DX8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.99■□□□□ 0.63
RTP4Q96DX8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RTP4Q96DX8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.98■□□□□ 0.63
RTP4Q96DX8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RTP4Q96DX8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 MIR1224-201ENST00000408193 85 ntBASIC18.98■□□□□ 0.63
RTP4Q96DX8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.98■□□□□ 0.63
RTP4Q96DX8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RTP4Q96DX8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.98■□□□□ 0.63
RTP4Q96DX8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
RTP4Q96DX8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.98■□□□□ 0.63
RTP4Q96DX8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.98■□□□□ 0.63
RTP4Q96DX8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.98■□□□□ 0.63
RTP4Q96DX8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RTP4Q96DX8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTP4Q96DX8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 AL355355.2-201ENST00000442321 338 ntBASIC18.97■□□□□ 0.63
RTP4Q96DX8 KRT18P21-201ENST00000515767 1272 ntBASIC18.97■□□□□ 0.63
RTP4Q96DX8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 MIR3180-5-201ENST00000583743 153 ntBASIC18.97■□□□□ 0.63
RTP4Q96DX8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTP4Q96DX8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RTP4Q96DX8 ESPNP-201ENST00000270691 2015 ntBASIC18.96■□□□□ 0.63
RTP4Q96DX8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RTP4Q96DX8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RTP4Q96DX8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms