Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.16■□□□□ 0.66
HDAC11Q96DB2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 TSPY17P-201ENST00000450329 467 ntBASIC19.16■□□□□ 0.66
HDAC11Q96DB2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 C2orf69P3-201ENST00000565542 1120 ntBASIC19.16■□□□□ 0.66
HDAC11Q96DB2 AL353719.1-201ENST00000566847 864 ntBASIC19.16■□□□□ 0.66
HDAC11Q96DB2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 MIR4674-201ENST00000582457 87 ntBASIC19.16■□□□□ 0.66
HDAC11Q96DB2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC11Q96DB2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 CCR12P-201ENST00000446203 998 ntBASIC19.15■□□□□ 0.66
HDAC11Q96DB2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 KRT8P45-201ENST00000414328 1447 ntBASIC19.15■□□□□ 0.66
HDAC11Q96DB2 AC092338.2-201ENST00000568827 1415 ntBASIC19.15■□□□□ 0.66
HDAC11Q96DB2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC11Q96DB2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HDAC11Q96DB2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HDAC11Q96DB2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HDAC11Q96DB2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HDAC11Q96DB2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.14■□□□□ 0.66
HDAC11Q96DB2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HDAC11Q96DB2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 TSPY14P-201ENST00000303979 915 ntBASIC19.13■□□□□ 0.65
HDAC11Q96DB2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 AP003041.3-201ENST00000527151 707 ntBASIC19.13■□□□□ 0.65
HDAC11Q96DB2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 AL499627.1-201ENST00000569373 2188 ntBASIC19.13■□□□□ 0.65
HDAC11Q96DB2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HDAC11Q96DB2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms