Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 Z98882.1-201ENST00000622160 2253 ntBASIC18.84■□□□□ 0.61
TTC28Q96AY4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TTC28Q96AY4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.84■□□□□ 0.61
TTC28Q96AY4 AC236430.1-201ENST00000402231 743 ntBASIC18.84■□□□□ 0.61
TTC28Q96AY4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.84■□□□□ 0.61
TTC28Q96AY4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.84■□□□□ 0.61
TTC28Q96AY4 AC109322.1-201ENST00000524499 1264 ntBASIC18.84■□□□□ 0.61
TTC28Q96AY4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.84■□□□□ 0.61
TTC28Q96AY4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.84■□□□□ 0.61
TTC28Q96AY4 AL390955.2-201ENST00000603032 514 ntBASIC18.84■□□□□ 0.61
TTC28Q96AY4 AC084346.2-201ENST00000607097 949 ntBASIC18.84■□□□□ 0.61
TTC28Q96AY4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TTC28Q96AY4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.84■□□□□ 0.61
TTC28Q96AY4 AC097374.2-201ENST00000618617 1306 ntBASIC18.84■□□□□ 0.61
TTC28Q96AY4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC28Q96AY4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TTC28Q96AY4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TTC28Q96AY4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC28Q96AY4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.83■□□□□ 0.61
TTC28Q96AY4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.83■□□□□ 0.61
TTC28Q96AY4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.83■□□□□ 0.61
TTC28Q96AY4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC28Q96AY4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.83■□□□□ 0.61
TTC28Q96AY4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TTC28Q96AY4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
TTC28Q96AY4 AIRN-201ENST00000601203 4374 ntBASIC18.83■□□□□ 0.61
TTC28Q96AY4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TTC28Q96AY4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC28Q96AY4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC28Q96AY4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
TTC28Q96AY4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
TTC28Q96AY4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TTC28Q96AY4 AC112777.1-201ENST00000540175 1423 ntBASIC18.83■□□□□ 0.6
TTC28Q96AY4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TTC28Q96AY4 AL138831.2-201ENST00000606564 490 ntBASIC18.83■□□□□ 0.6
TTC28Q96AY4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
TTC28Q96AY4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC28Q96AY4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TTC28Q96AY4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TTC28Q96AY4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC28Q96AY4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TTC28Q96AY4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC28Q96AY4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC28Q96AY4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC28Q96AY4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.82■□□□□ 0.6
TTC28Q96AY4 AC015911.4-201ENST00000588022 1070 ntBASIC18.82■□□□□ 0.6
TTC28Q96AY4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.82■□□□□ 0.6
TTC28Q96AY4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC28Q96AY4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC28Q96AY4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC28Q96AY4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TTC28Q96AY4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TTC28Q96AY4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.82■□□□□ 0.6
TTC28Q96AY4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.82■□□□□ 0.6
TTC28Q96AY4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.82■□□□□ 0.6
TTC28Q96AY4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TTC28Q96AY4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC28Q96AY4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC28Q96AY4 AC244015.2-201ENST00000616358 1861 ntBASIC18.82■□□□□ 0.6
TTC28Q96AY4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TTC28Q96AY4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.82■□□□□ 0.6
TTC28Q96AY4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 AC092902.6-201ENST00000641783 218 ntBASIC18.81■□□□□ 0.6
TTC28Q96AY4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 TSPY16P-201ENST00000449843 468 ntBASIC18.81■□□□□ 0.6
TTC28Q96AY4 HCG4B-203ENST00000450128 991 ntBASIC18.81■□□□□ 0.6
TTC28Q96AY4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 AC025678.2-201ENST00000562061 970 ntBASIC18.81■□□□□ 0.6
TTC28Q96AY4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 AL358472.5-202ENST00000641448 1267 ntBASIC18.81■□□□□ 0.6
TTC28Q96AY4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TTC28Q96AY4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TTC28Q96AY4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.8■□□□□ 0.6
TTC28Q96AY4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC28Q96AY4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.8■□□□□ 0.6
TTC28Q96AY4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC28Q96AY4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC28Q96AY4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.8■□□□□ 0.6
TTC28Q96AY4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms