Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 AC126763.1-201ENST00000552015 2118 ntBASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 AL162741.1-201ENST00000565563 1558 ntBASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN4IP1Q8WWV3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 RPPH1-201ENST00000516869 333 ntBASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RTN4IP1Q8WWV3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN4IP1Q8WWV3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms