Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CKAP2Q8WWK9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 AL357033.4-201ENST00000617703 1807 ntBASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.49■□□□□ 0.55
CKAP2Q8WWK9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CKAP2Q8WWK9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 AC006015.1-201ENST00000429970 570 ntBASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CKAP2Q8WWK9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CKAP2Q8WWK9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms