Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHROOM3Q8TF72 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 AC090164.3-201ENST00000610780 2143 ntBASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHROOM3Q8TF72 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHROOM3Q8TF72 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 NEK4P2-201ENST00000580004 1012 ntBASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 AC005363.2-201ENST00000618631 242 ntBASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 AC073592.3-201ENST00000625118 1834 ntBASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 DUSP5P1-201ENST00000441325 1139 ntBASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 AC104076.2-201ENST00000448912 469 ntBASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 EGLN1P1-201ENST00000531623 762 ntBASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 AC120498.9-201ENST00000339021 3867 ntBASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 ESPNP-201ENST00000270691 2015 ntBASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM3Q8TF72 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM3Q8TF72 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM3Q8TF72 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.94■□□□□ 0.62
SHROOM3Q8TF72 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM3Q8TF72 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SHROOM3Q8TF72 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SHROOM3Q8TF72 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SHROOM3Q8TF72 LIN28AP1-201ENST00000429574 405 ntBASIC18.94■□□□□ 0.62
SHROOM3Q8TF72 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms