Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 AC034236.2-201ENST00000606662 1610 ntBASIC19.29■□□□□ 0.68
SH3RF2Q8TEC5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 AC006333.2-201ENST00000607957 2099 ntBASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 TSSC2-201ENST00000450217 709 ntBASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 AC068587.9-201ENST00000641814 219 ntBASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 AC016734.2-201ENST00000624325 1377 ntBASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3RF2Q8TEC5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 MIR662-201ENST00000384847 95 ntBASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 AL121894.2-201ENST00000602977 491 ntBASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3RF2Q8TEC5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SH3RF2Q8TEC5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 AC012313.10-201ENST00000623509 926 ntBASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 AC093525.10-201ENST00000625130 1569 ntBASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH3RF2Q8TEC5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SH3RF2Q8TEC5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms