Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4Y2Q8TD47 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4Y2Q8TD47 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4Y2Q8TD47 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS4Y2Q8TD47 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 AC004980.1-204ENST00000429707 299 ntBASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 TSPY20P-201ENST00000450910 630 ntBASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.29■□□□□ 0.2
RPS4Y2Q8TD47 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 RCC2P3-201ENST00000418112 1537 ntBASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RPS4Y2Q8TD47 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4Y2Q8TD47 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS4Y2Q8TD47 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms