Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 AC126763.1-201ENST00000552015 2118 ntBASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 AC007663.1-201ENST00000438948 1240 ntBASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCLL1Q8TB92 ABALON-201ENST00000629058 1903 ntBASIC18.27■□□□□ 0.51
HMGCLL1Q8TB92 LINC01568-207ENST00000641790 1380 ntBASIC18.27■□□□□ 0.51
HMGCLL1Q8TB92 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMGCLL1Q8TB92 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.27■□□□□ 0.51
HMGCLL1Q8TB92 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.27■□□□□ 0.51
HMGCLL1Q8TB92 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HMGCLL1Q8TB92 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 KRT18P22-201ENST00000402024 1347 ntBASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 KRT8P32-201ENST00000512863 1461 ntBASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLL1Q8TB92 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 AC008622.2-201ENST00000617006 1229 ntBASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 AC073592.3-201ENST00000625118 1834 ntBASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMGCLL1Q8TB92 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.24■□□□□ 0.51
HMGCLL1Q8TB92 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms