Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 AC022211.2-201ENST00000585075 2527 ntBASIC13.93□□□□□ -0.18
NUP35Q8NFH5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP35Q8NFH5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 AC011676.5-201ENST00000624864 2660 ntBASIC13.92□□□□□ -0.18
NUP35Q8NFH5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 AL139384.1-201ENST00000612143 3047 ntBASIC13.92□□□□□ -0.18
NUP35Q8NFH5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 AL589743.5-201ENST00000616611 1050 ntBASIC13.92□□□□□ -0.18
NUP35Q8NFH5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP35Q8NFH5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 FLJ13224-201ENST00000313737 1514 ntBASIC13.91□□□□□ -0.18
NUP35Q8NFH5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 AL355472.2-201ENST00000422958 438 ntBASIC13.91□□□□□ -0.18
NUP35Q8NFH5 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 MYC-208ENST00000641036 567 ntBASIC13.91□□□□□ -0.18
NUP35Q8NFH5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NUP35Q8NFH5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms