Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 ANO7L1-203ENST00000602586 1720 ntBASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CLIP4Q8N3C7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 AL139384.1-201ENST00000612143 3047 ntBASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 KSR1P1-201ENST00000446298 240 ntBASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLIP4Q8N3C7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 TNRC18P3-201ENST00000441896 2691 ntBASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 TSPY20P-201ENST00000450910 630 ntBASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 AC091390.4-202ENST00000476426 537 ntBASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 CR392000.1-201ENST00000624770 1228 ntBASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP4Q8N3C7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms