Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.03■□□□□ 0.64
SIX5Q8N196 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.03■□□□□ 0.64
SIX5Q8N196 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SIX5Q8N196 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIX5Q8N196 PMS2P7-201ENST00000506558 1336 ntBASIC19.02■□□□□ 0.64
SIX5Q8N196 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIX5Q8N196 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.02■□□□□ 0.64
SIX5Q8N196 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIX5Q8N196 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SIX5Q8N196 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SIX5Q8N196 BX842568.4-201ENST00000421222 227 ntBASIC19.02■□□□□ 0.64
SIX5Q8N196 KRT18P67-201ENST00000432816 1264 ntBASIC19.02■□□□□ 0.64
SIX5Q8N196 AF186996.4-201ENST00000467186 377 ntBASIC19.02■□□□□ 0.64
SIX5Q8N196 AC093909.1-201ENST00000504731 1122 ntBASIC19.02■□□□□ 0.64
SIX5Q8N196 RNPS1P1-201ENST00000507437 918 ntBASIC19.02■□□□□ 0.64
SIX5Q8N196 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.02■□□□□ 0.64
SIX5Q8N196 TERC-201ENST00000602385 541 ntBASIC19.02■□□□□ 0.64
SIX5Q8N196 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SIX5Q8N196 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SIX5Q8N196 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SIX5Q8N196 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SIX5Q8N196 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SIX5Q8N196 AL512408.1-201ENST00000569378 2000 ntBASIC19.01■□□□□ 0.63
SIX5Q8N196 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX5Q8N196 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX5Q8N196 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX5Q8N196 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX5Q8N196 IGHGP-201ENST00000390555 1178 ntBASIC19.01■□□□□ 0.63
SIX5Q8N196 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX5Q8N196 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.01■□□□□ 0.63
SIX5Q8N196 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX5Q8N196 AC106730.1-201ENST00000566722 1090 ntBASIC19.01■□□□□ 0.63
SIX5Q8N196 AP005901.3-202ENST00000581653 237 ntBASIC19.01■□□□□ 0.63
SIX5Q8N196 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SIX5Q8N196 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.01■□□□□ 0.63
SIX5Q8N196 AC148477.8-201ENST00000624298 468 ntBASIC19.01■□□□□ 0.63
SIX5Q8N196 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SIX5Q8N196 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SIX5Q8N196 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX5Q8N196 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
SIX5Q8N196 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.01■□□□□ 0.63
SIX5Q8N196 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.01■□□□□ 0.63
SIX5Q8N196 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIX5Q8N196 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIX5Q8N196 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
SIX5Q8N196 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIX5Q8N196 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.01■□□□□ 0.63
SIX5Q8N196 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19■□□□□ 0.63
SIX5Q8N196 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SIX5Q8N196 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SIX5Q8N196 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19■□□□□ 0.63
SIX5Q8N196 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19■□□□□ 0.63
SIX5Q8N196 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19■□□□□ 0.63
SIX5Q8N196 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19■□□□□ 0.63
SIX5Q8N196 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19■□□□□ 0.63
SIX5Q8N196 RN7SL606P-201ENST00000472779 293 ntBASIC19■□□□□ 0.63
SIX5Q8N196 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19■□□□□ 0.63
SIX5Q8N196 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19■□□□□ 0.63
SIX5Q8N196 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19■□□□□ 0.63
SIX5Q8N196 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SIX5Q8N196 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SIX5Q8N196 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SIX5Q8N196 AC008556.1-201ENST00000610908 2040 ntBASIC19■□□□□ 0.63
SIX5Q8N196 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIX5Q8N196 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
SIX5Q8N196 HOXB1-202ENST00000577092 1414 ntBASIC19■□□□□ 0.63
SIX5Q8N196 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SIX5Q8N196 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SIX5Q8N196 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 AL109659.2-201ENST00000606809 1674 ntBASIC18.99■□□□□ 0.63
SIX5Q8N196 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.99■□□□□ 0.63
SIX5Q8N196 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SIX5Q8N196 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SIX5Q8N196 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.99■□□□□ 0.63
SIX5Q8N196 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.99■□□□□ 0.63
SIX5Q8N196 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIX5Q8N196 AC091607.1-201ENST00000490318 1060 ntBASIC18.99■□□□□ 0.63
SIX5Q8N196 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.99■□□□□ 0.63
SIX5Q8N196 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.99■□□□□ 0.63
SIX5Q8N196 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms