Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC006538.3-201ENST00000612495 578 ntBASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEFF1Q8IYR6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 GPR32P1-201ENST00000601788 811 ntBASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 AC124864.1-201ENST00000623408 392 ntBASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 SLC25A24-204ENST00000569674 2357 ntBASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEFF1Q8IYR6 TEX21P-204ENST00000641479 1693 ntBASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEFF1Q8IYR6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 AC120114.3-201ENST00000611923 658 ntBASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 AL592071.1-201ENST00000611956 408 ntBASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEFF1Q8IYR6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
TMEFF1Q8IYR6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
TMEFF1Q8IYR6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 AC006333.2-201ENST00000607957 2099 ntBASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 IGHV3-47-201ENST00000425060 335 ntBASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 GUSBP12-201ENST00000513727 720 ntBASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 HLA-A-201ENST00000376802 1334 ntBASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEFF1Q8IYR6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms