Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 AC036111.1-201ENST00000533973 1582 ntBASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 AC009113.1-201ENST00000570267 2443 ntBASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 AC104581.1-202ENST00000635932 2618 ntBASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC65Q8IXS2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC65Q8IXS2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC65Q8IXS2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC65Q8IXS2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC65Q8IXS2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC65Q8IXS2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
CCDC65Q8IXS2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 INGX-201ENST00000359239 846 ntBASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 CR769767.2-201ENST00000622735 460 ntBASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC65Q8IXS2 MYLKP1-201ENST00000509077 1580 ntBASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 AP000593.1-201ENST00000393668 712 ntBASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 WWOX-216ENST00000569818 525 ntBASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC65Q8IXS2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC65Q8IXS2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC65Q8IXS2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC65Q8IXS2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC65Q8IXS2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC65Q8IXS2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC65Q8IXS2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC65Q8IXS2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC65Q8IXS2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC65Q8IXS2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms