Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 AC011498.5-201ENST00000592027 486 ntBASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC60Q8IWA6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC60Q8IWA6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 AL499627.1-201ENST00000569373 2188 ntBASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 RNF126P1-202ENST00000569893 925 ntBASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 AC099343.3-201ENST00000605834 2503 ntBASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC60Q8IWA6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC60Q8IWA6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CCDC60Q8IWA6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC60Q8IWA6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC60Q8IWA6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC60Q8IWA6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC60Q8IWA6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 AL163051.1-201ENST00000569214 1512 ntBASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 AP000593.1-201ENST00000393668 712 ntBASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC60Q8IWA6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms