Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LINC00602-201ENST00000629776 2065 ntBASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 AC105020.6-201ENST00000621523 1217 ntBASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LYSMD2Q8IV50 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 KRT18P68-201ENST00000392293 1000 ntBASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 AC023632.3-201ENST00000521633 145 ntBASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 AC018553.1-201ENST00000616682 1458 ntBASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LYSMD2Q8IV50 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 AL139246.5-201ENST00000606645 996 ntBASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 REXO1L9P-201ENST00000604264 2108 ntBASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.34■□□□□ 0.21
LYSMD2Q8IV50 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.33■□□□□ 0.21
LYSMD2Q8IV50 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD2Q8IV50 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD2Q8IV50 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LYSMD2Q8IV50 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
LYSMD2Q8IV50 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
LYSMD2Q8IV50 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LYSMD2Q8IV50 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYSMD2Q8IV50 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms