Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 AC113347.1-201ENST00000413321 391 ntBASIC17.46■□□□□ 0.39
CCDC71Q8IV32 AL137013.1-201ENST00000432946 1228 ntBASIC17.46■□□□□ 0.39
CCDC71Q8IV32 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 AL590326.2-201ENST00000625139 305 ntBASIC17.46■□□□□ 0.39
CCDC71Q8IV32 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 AL031985.4-201ENST00000642138 673 ntBASIC17.46■□□□□ 0.39
CCDC71Q8IV32 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC71Q8IV32 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC71Q8IV32 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.46■□□□□ 0.38
CCDC71Q8IV32 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.46■□□□□ 0.38
CCDC71Q8IV32 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC71Q8IV32 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 C1QL1P1-201ENST00000568105 661 ntBASIC17.45■□□□□ 0.38
CCDC71Q8IV32 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC71Q8IV32 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 TERF1P1-201ENST00000311003 1181 ntBASIC17.44■□□□□ 0.38
CCDC71Q8IV32 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.44■□□□□ 0.38
CCDC71Q8IV32 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC71Q8IV32 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.43■□□□□ 0.38
CCDC71Q8IV32 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC71Q8IV32 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms