Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 AC010240.3-201ENST00000607688 395 ntBASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 MYC-208ENST00000641036 567 ntBASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM4Q86VH4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 AP000593.1-201ENST00000393668 712 ntBASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 MIR3917-201ENST00000580971 93 ntBASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRTM4Q86VH4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 AC112907.2-201ENST00000448639 330 ntBASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 AL671277.2-201ENST00000458060 996 ntBASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 AL157888.1-201ENST00000631930 593 ntBASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM4Q86VH4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 KRT8P50-201ENST00000562022 1438 ntBASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRTM4Q86VH4 AC009065.1-201ENST00000564055 1225 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms