Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 IRX1P1-201ENST00000438849 1838 ntBASIC11.49□□□□□ -0.57
VPS13BQ7Z7G8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 AL049840.3-201ENST00000602669 611 ntBASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 POM121L3P-201ENST00000419331 1163 ntBASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
VPS13BQ7Z7G8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 HNRNPDP1-201ENST00000439535 754 ntBASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 IGHV3-41-201ENST00000613121 348 ntBASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 FGFR3P6-201ENST00000457012 610 ntBASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 AC034105.1-201ENST00000563488 319 ntBASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 AC112497.1-201ENST00000624824 639 ntBASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13BQ7Z7G8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 AL139424.1-201ENST00000607572 797 ntBASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 KRT8P7-201ENST00000533003 1432 ntBASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13BQ7Z7G8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms