Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
LCA10Q71F78 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LCA10Q71F78 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 SERP1-208ENST00000491660 830 ntTSL 2 BASIC10.05□□□□□ -0.8
LCA10Q71F78 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC10.05□□□□□ -0.8
LCA10Q71F78 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC10.05□□□□□ -0.8
LCA10Q71F78 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC10.05□□□□□ -0.8
LCA10Q71F78 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 AL136967.2-201ENST00000623968 743 ntBASIC10.05□□□□□ -0.8
LCA10Q71F78 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC10.05□□□□□ -0.8
LCA10Q71F78 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC10.05□□□□□ -0.8
LCA10Q71F78 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 WIZP1-201ENST00000531444 2299 ntBASIC10.05□□□□□ -0.8
LCA10Q71F78 AC024909.3-201ENST00000611513 2257 ntBASIC10.05□□□□□ -0.8
LCA10Q71F78 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
LCA10Q71F78 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC10.05□□□□□ -0.8
LCA10Q71F78 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
LCA10Q71F78 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC10.05□□□□□ -0.8
LCA10Q71F78 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LCA10Q71F78 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LCA10Q71F78 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 TSPY26P-202ENST00000565928 3884 ntBASIC10.04□□□□□ -0.8
LCA10Q71F78 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC10.04□□□□□ -0.8
LCA10Q71F78 NME4-202ENST00000382940 766 ntTSL 3 BASIC10.04□□□□□ -0.8
LCA10Q71F78 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 AC138907.5-202ENST00000569484 235 ntBASIC10.04□□□□□ -0.8
LCA10Q71F78 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 AC110285.6-201ENST00000617652 491 ntBASIC10.04□□□□□ -0.8
LCA10Q71F78 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 NME4-211ENST00000620944 1193 ntTSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 MIR6084-201ENST00000622012 110 ntBASIC10.04□□□□□ -0.8
LCA10Q71F78 AL358852.1-201ENST00000623174 1268 ntBASIC10.04□□□□□ -0.8
LCA10Q71F78 MIR2861-201ENST00000636310 90 ntBASIC10.04□□□□□ -0.8
LCA10Q71F78 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 MYB-201ENST00000316528 3571 ntTSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 MYB-241ENST00000616088 3573 ntTSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
LCA10Q71F78 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC10.04□□□□□ -0.8
LCA10Q71F78 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LCA10Q71F78 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LCA10Q71F78 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms