Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.15■□□□□ 0.34
PTCHD4Q6ZW05 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
PTCHD4Q6ZW05 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
PTCHD4Q6ZW05 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
PTCHD4Q6ZW05 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PTCHD4Q6ZW05 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PTCHD4Q6ZW05 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 TSPY21P-201ENST00000433481 731 ntBASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTCHD4Q6ZW05 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTCHD4Q6ZW05 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms