Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 AC133681.1-201ENST00000465482 601 ntBASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 PRKY-204ENST00000533551 1019 ntBASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXR1Q6PIV2 AL645608.8-201ENST00000606034 2086 ntBASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 AC134043.2-201ENST00000624206 2238 ntBASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 AC113410.3-201ENST00000623366 203 ntBASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXR1Q6PIV2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXR1Q6PIV2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXR1Q6PIV2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXR1Q6PIV2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXR1Q6PIV2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXR1Q6PIV2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXR1Q6PIV2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 CICP6-201ENST00000457191 2729 ntBASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXR1Q6PIV2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXR1Q6PIV2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXR1Q6PIV2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXR1Q6PIV2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXR1Q6PIV2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXR1Q6PIV2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXR1Q6PIV2 AC087499.1-201ENST00000418141 1075 ntBASIC19.38■□□□□ 0.69
FOXR1Q6PIV2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXR1Q6PIV2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
FOXR1Q6PIV2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXR1Q6PIV2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms