Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 AC005332.7-201ENST00000614046 2005 ntBASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 KRT18P23-201ENST00000435622 1283 ntBASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF17Q5VTA0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 AC034232.1-201ENST00000506026 1064 ntBASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF17Q5VTA0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 MIR564-202ENST00000385049 94 ntBASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF17Q5VTA0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.71■□□□□ 0.42
PRAMEF17Q5VTA0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PRAMEF17Q5VTA0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF17Q5VTA0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms