Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 KRT8P50-201ENST00000562022 1438 ntBASIC19.34■□□□□ 0.69
LRRC38Q5VT99 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRC38Q5VT99 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC38Q5VT99 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC38Q5VT99 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
LRRC38Q5VT99 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LRRC38Q5VT99 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.33■□□□□ 0.69
LRRC38Q5VT99 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC38Q5VT99 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC38Q5VT99 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.33■□□□□ 0.69
LRRC38Q5VT99 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 SLC25A1P2-201ENST00000430693 912 ntBASIC19.33■□□□□ 0.68
LRRC38Q5VT99 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 AP003071.4-201ENST00000562276 1284 ntBASIC19.33■□□□□ 0.68
LRRC38Q5VT99 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRC38Q5VT99 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 MIR4674-201ENST00000582457 87 ntBASIC19.32■□□□□ 0.68
LRRC38Q5VT99 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC38Q5VT99 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC38Q5VT99 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 MIR718-201ENST00000390190 70 ntBASIC19.3■□□□□ 0.68
LRRC38Q5VT99 AC008550.1-201ENST00000511500 884 ntBASIC19.3■□□□□ 0.68
LRRC38Q5VT99 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms