Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 PRSS44-201ENST00000515154 1146 ntBASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 AC067852.2-201ENST00000590513 2313 ntBASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KHDC1Q4VXA5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 IRX1P1-201ENST00000438849 1838 ntBASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 AC211429.1-201ENST00000415277 523 ntBASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KHDC1Q4VXA5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KHDC1Q4VXA5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KHDC1Q4VXA5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
KHDC1Q4VXA5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KHDC1Q4VXA5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
KHDC1Q4VXA5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KHDC1Q4VXA5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KHDC1Q4VXA5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KHDC1Q4VXA5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 INGX-201ENST00000359239 846 ntBASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.83■□□□□ 0.6
KHDC1Q4VXA5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 AC133561.5-201ENST00000635547 218 ntBASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KHDC1Q4VXA5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms