Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 AC090616.6-201ENST00000582640 721 ntBASIC22.29■■□□□ 1.16
PDS5AQ29RF7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PDS5AQ29RF7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
PDS5AQ29RF7 AC009102.3-201ENST00000623118 1491 ntBASIC22.28■■□□□ 1.16
PDS5AQ29RF7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 MYLKP1-201ENST00000509077 1580 ntBASIC22.27■■□□□ 1.16
PDS5AQ29RF7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 AL450487.1-201ENST00000426799 995 ntBASIC22.27■■□□□ 1.16
PDS5AQ29RF7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 AC113404.2-201ENST00000507884 177 ntBASIC22.27■■□□□ 1.16
PDS5AQ29RF7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.27■■□□□ 1.16
PDS5AQ29RF7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDS5AQ29RF7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
PDS5AQ29RF7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 AC008687.5-201ENST00000593746 558 ntBASIC22.26■■□□□ 1.15
PDS5AQ29RF7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDS5AQ29RF7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC22.25■■□□□ 1.15
PDS5AQ29RF7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms