Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 TSPY14P-201ENST00000303979 915 ntBASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 AC128688.1-201ENST00000487626 519 ntBASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 EGLN1P1-201ENST00000531623 762 ntBASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 LINC01023-201ENST00000606054 436 ntBASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 AC116562.4-202ENST00000641738 218 ntBASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 AC093525.10-201ENST00000625130 1569 ntBASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RASGEF1BQ0VAM2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 KRT18P22-201ENST00000402024 1347 ntBASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RASGEF1BQ0VAM2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 AL031598.1-201ENST00000561511 1773 ntBASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 TSPY17P-201ENST00000450329 467 ntBASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 AC145285.6-201ENST00000604632 637 ntBASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.9■□□□□ 0.3
RASGEF1BQ0VAM2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms