Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAE1P78406 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAE1P78406 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAE1P78406 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.68■□□□□ 0.42
RAE1P78406 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.67■□□□□ 0.42
RAE1P78406 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.67■□□□□ 0.42
RAE1P78406 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RAE1P78406 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAE1P78406 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAE1P78406 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.67■□□□□ 0.42
RAE1P78406 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.67■□□□□ 0.42
RAE1P78406 TSPY15P-201ENST00000457163 923 ntBASIC17.67■□□□□ 0.42
RAE1P78406 AP003041.3-201ENST00000527151 707 ntBASIC17.67■□□□□ 0.42
RAE1P78406 MIR3180-5-201ENST00000583743 153 ntBASIC17.67■□□□□ 0.42
RAE1P78406 AC034236.2-201ENST00000606662 1610 ntBASIC17.67■□□□□ 0.42
RAE1P78406 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.67■□□□□ 0.42
RAE1P78406 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAE1P78406 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAE1P78406 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 AC036111.1-201ENST00000533973 1582 ntBASIC17.66■□□□□ 0.42
RAE1P78406 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.66■□□□□ 0.42
RAE1P78406 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RAE1P78406 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RAE1P78406 ESPNP-201ENST00000270691 2015 ntBASIC17.66■□□□□ 0.42
RAE1P78406 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.66■□□□□ 0.42
RAE1P78406 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RAE1P78406 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
RAE1P78406 SLC25A1P2-201ENST00000430693 912 ntBASIC17.66■□□□□ 0.42
RAE1P78406 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAE1P78406 AL353719.1-201ENST00000566847 864 ntBASIC17.66■□□□□ 0.42
RAE1P78406 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.66■□□□□ 0.42
RAE1P78406 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.66■□□□□ 0.42
RAE1P78406 AP006294.2-201ENST00000641667 209 ntBASIC17.66■□□□□ 0.42
RAE1P78406 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAE1P78406 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.66■□□□□ 0.42
RAE1P78406 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAE1P78406 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.66■□□□□ 0.42
RAE1P78406 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.65■□□□□ 0.42
RAE1P78406 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.65■□□□□ 0.42
RAE1P78406 AC092338.2-201ENST00000568827 1415 ntBASIC17.65■□□□□ 0.42
RAE1P78406 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
RAE1P78406 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 AC093677.2-201ENST00000600169 1863 ntBASIC17.65■□□□□ 0.42
RAE1P78406 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.65■□□□□ 0.42
RAE1P78406 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAE1P78406 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.65■□□□□ 0.42
RAE1P78406 MIR1238-201ENST00000408483 83 ntBASIC17.65■□□□□ 0.42
RAE1P78406 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.65■□□□□ 0.42
RAE1P78406 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.65■□□□□ 0.42
RAE1P78406 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.65■□□□□ 0.42
RAE1P78406 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.65■□□□□ 0.42
RAE1P78406 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.65■□□□□ 0.42
RAE1P78406 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.65■□□□□ 0.42
RAE1P78406 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.65■□□□□ 0.42
RAE1P78406 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAE1P78406 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.65■□□□□ 0.42
RAE1P78406 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.65■□□□□ 0.42
RAE1P78406 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.64■□□□□ 0.42
RAE1P78406 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAE1P78406 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAE1P78406 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAE1P78406 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.64■□□□□ 0.41
RAE1P78406 AC018470.1-201ENST00000624790 3129 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms