Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GABREP78334 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.69■□□□□ 0.42
GABREP78334 AC008556.1-201ENST00000610908 2040 ntBASIC17.69■□□□□ 0.42
GABREP78334 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABREP78334 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GABREP78334 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABREP78334 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABREP78334 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABREP78334 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABREP78334 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABREP78334 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.68■□□□□ 0.42
GABREP78334 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.68■□□□□ 0.42
GABREP78334 TSPY12P-201ENST00000421279 868 ntBASIC17.68■□□□□ 0.42
GABREP78334 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.68■□□□□ 0.42
GABREP78334 VENTXP7-201ENST00000475503 772 ntBASIC17.68■□□□□ 0.42
GABREP78334 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GABREP78334 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
GABREP78334 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.68■□□□□ 0.42
GABREP78334 HOXB1-202ENST00000577092 1414 ntBASIC17.68■□□□□ 0.42
GABREP78334 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.68■□□□□ 0.42
GABREP78334 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABREP78334 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABREP78334 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.68■□□□□ 0.42
GABREP78334 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GABREP78334 AFG3L1P-217ENST00000557444 2447 ntBASIC17.68■□□□□ 0.42
GABREP78334 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
GABREP78334 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GABREP78334 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GABREP78334 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.67■□□□□ 0.42
GABREP78334 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GABREP78334 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.67■□□□□ 0.42
GABREP78334 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
GABREP78334 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.67■□□□□ 0.42
GABREP78334 SAPCD2P3-201ENST00000455031 850 ntBASIC17.67■□□□□ 0.42
GABREP78334 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.67■□□□□ 0.42
GABREP78334 AL592071.1-201ENST00000611956 408 ntBASIC17.67■□□□□ 0.42
GABREP78334 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GABREP78334 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GABREP78334 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GABREP78334 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.67■□□□□ 0.42
GABREP78334 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.67■□□□□ 0.42
GABREP78334 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.67■□□□□ 0.42
GABREP78334 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABREP78334 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.66■□□□□ 0.42
GABREP78334 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.66■□□□□ 0.42
GABREP78334 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GABREP78334 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.66■□□□□ 0.42
GABREP78334 AKR1C7P-201ENST00000305623 895 ntBASIC17.66■□□□□ 0.42
GABREP78334 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 NUS1P2-201ENST00000417358 873 ntBASIC17.66■□□□□ 0.42
GABREP78334 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.66■□□□□ 0.42
GABREP78334 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 GUSBP12-201ENST00000513727 720 ntBASIC17.66■□□□□ 0.42
GABREP78334 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.66■□□□□ 0.42
GABREP78334 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.66■□□□□ 0.42
GABREP78334 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.66■□□□□ 0.42
GABREP78334 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 AC124864.1-201ENST00000623408 392 ntBASIC17.66■□□□□ 0.42
GABREP78334 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.66■□□□□ 0.42
GABREP78334 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.66■□□□□ 0.42
GABREP78334 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.66■□□□□ 0.42
GABREP78334 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
GABREP78334 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
GABREP78334 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 AL512353.2-201ENST00000448759 1962 ntBASIC17.66■□□□□ 0.42
GABREP78334 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GABREP78334 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABREP78334 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.66■□□□□ 0.42
GABREP78334 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
GABREP78334 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABREP78334 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABREP78334 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABREP78334 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABREP78334 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.65■□□□□ 0.42
GABREP78334 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms