Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CXCR4P61073 RCC2P6-201ENST00000526625 1557 ntBASIC16.98■□□□□ 0.31
CXCR4P61073 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CXCR4P61073 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CXCR4P61073 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.97■□□□□ 0.31
CXCR4P61073 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.97■□□□□ 0.31
CXCR4P61073 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.97■□□□□ 0.31
CXCR4P61073 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.97■□□□□ 0.31
CXCR4P61073 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.97■□□□□ 0.31
CXCR4P61073 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.97■□□□□ 0.31
CXCR4P61073 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 AC068587.9-201ENST00000641814 219 ntBASIC16.97■□□□□ 0.31
CXCR4P61073 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.97■□□□□ 0.31
CXCR4P61073 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.97■□□□□ 0.31
CXCR4P61073 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CXCR4P61073 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CXCR4P61073 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.97■□□□□ 0.31
CXCR4P61073 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CXCR4P61073 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CXCR4P61073 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.96■□□□□ 0.31
CXCR4P61073 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CXCR4P61073 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CXCR4P61073 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CXCR4P61073 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CXCR4P61073 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CXCR4P61073 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CXCR4P61073 AC006970.2-201ENST00000450065 779 ntBASIC16.96■□□□□ 0.31
CXCR4P61073 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.96■□□□□ 0.31
CXCR4P61073 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.96■□□□□ 0.31
CXCR4P61073 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.96■□□□□ 0.31
CXCR4P61073 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.96■□□□□ 0.31
CXCR4P61073 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.96■□□□□ 0.31
CXCR4P61073 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CXCR4P61073 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CXCR4P61073 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.96■□□□□ 0.31
CXCR4P61073 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CXCR4P61073 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.96■□□□□ 0.31
CXCR4P61073 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.96■□□□□ 0.31
CXCR4P61073 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CXCR4P61073 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CXCR4P61073 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CXCR4P61073 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CXCR4P61073 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.96■□□□□ 0.3
CXCR4P61073 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CXCR4P61073 KRT8P45-201ENST00000414328 1447 ntBASIC16.96■□□□□ 0.3
CXCR4P61073 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.95■□□□□ 0.3
CXCR4P61073 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.95■□□□□ 0.3
CXCR4P61073 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CXCR4P61073 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CXCR4P61073 SLC29A4P1-201ENST00000398760 971 ntBASIC16.95■□□□□ 0.3
CXCR4P61073 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.95■□□□□ 0.3
CXCR4P61073 TUBB8P6-201ENST00000436895 1288 ntBASIC16.95■□□□□ 0.3
CXCR4P61073 TSPY23P-201ENST00000440136 739 ntBASIC16.95■□□□□ 0.3
CXCR4P61073 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.95■□□□□ 0.3
CXCR4P61073 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CXCR4P61073 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CXCR4P61073 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.95■□□□□ 0.3
CXCR4P61073 REXO1L9P-201ENST00000604264 2108 ntBASIC16.95■□□□□ 0.3
CXCR4P61073 HLA-B-256ENST00000639848 1089 ntBASIC16.95■□□□□ 0.3
CXCR4P61073 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CXCR4P61073 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CXCR4P61073 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CXCR4P61073 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.95■□□□□ 0.3
CXCR4P61073 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.95■□□□□ 0.3
CXCR4P61073 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.95■□□□□ 0.3
CXCR4P61073 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCR4P61073 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CXCR4P61073 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.95■□□□□ 0.3
CXCR4P61073 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CXCR4P61073 AC008556.1-201ENST00000610908 2040 ntBASIC16.94■□□□□ 0.3
CXCR4P61073 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.94■□□□□ 0.3
CXCR4P61073 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCR4P61073 AC084018.2-201ENST00000613093 2607 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms