Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 HOXB1-202ENST00000577092 1414 ntBASIC18.35■□□□□ 0.53
SRP54P61011 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.35■□□□□ 0.53
SRP54P61011 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 MIR3917-201ENST00000580971 93 ntBASIC18.35■□□□□ 0.53
SRP54P61011 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.35■□□□□ 0.53
SRP54P61011 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.35■□□□□ 0.53
SRP54P61011 AL157888.1-201ENST00000631930 593 ntBASIC18.35■□□□□ 0.53
SRP54P61011 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.35■□□□□ 0.53
SRP54P61011 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
SRP54P61011 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP54P61011 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.35■□□□□ 0.53
SRP54P61011 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.35■□□□□ 0.53
SRP54P61011 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SRP54P61011 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SRP54P61011 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SRP54P61011 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SRP54P61011 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
SRP54P61011 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
SRP54P61011 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.34■□□□□ 0.53
SRP54P61011 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.34■□□□□ 0.53
SRP54P61011 AC104390.1-201ENST00000555663 520 ntBASIC18.34■□□□□ 0.53
SRP54P61011 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
SRP54P61011 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.34■□□□□ 0.53
SRP54P61011 AC069148.1-201ENST00000608741 768 ntBASIC18.34■□□□□ 0.53
SRP54P61011 AC068587.9-201ENST00000641814 219 ntBASIC18.34■□□□□ 0.53
SRP54P61011 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SRP54P61011 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SRP54P61011 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SRP54P61011 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.33■□□□□ 0.53
SRP54P61011 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SRP54P61011 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
SRP54P61011 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.33■□□□□ 0.53
SRP54P61011 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.33■□□□□ 0.53
SRP54P61011 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRP54P61011 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRP54P61011 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.33■□□□□ 0.53
SRP54P61011 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRP54P61011 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.33■□□□□ 0.52
SRP54P61011 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP54P61011 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRP54P61011 AL645929.1-201ENST00000420084 975 ntBASIC18.33■□□□□ 0.52
SRP54P61011 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP54P61011 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
SRP54P61011 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SRP54P61011 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.33■□□□□ 0.52
SRP54P61011 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.33■□□□□ 0.52
SRP54P61011 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRP54P61011 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
SRP54P61011 AC034236.2-201ENST00000606662 1610 ntBASIC18.33■□□□□ 0.52
SRP54P61011 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.33■□□□□ 0.52
SRP54P61011 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP54P61011 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRP54P61011 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP54P61011 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP54P61011 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.33■□□□□ 0.52
SRP54P61011 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP54P61011 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.32■□□□□ 0.52
SRP54P61011 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.32■□□□□ 0.52
SRP54P61011 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.32■□□□□ 0.52
SRP54P61011 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.32■□□□□ 0.52
SRP54P61011 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.32■□□□□ 0.52
SRP54P61011 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.32■□□□□ 0.52
SRP54P61011 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.32■□□□□ 0.52
SRP54P61011 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP54P61011 AC079602.3-201ENST00000623931 403 ntBASIC18.32■□□□□ 0.52
SRP54P61011 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms