Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.72■□□□□ 0.75
CACNA2D1P54289 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.72■□□□□ 0.75
CACNA2D1P54289 SEC1P-202ENST00000473944 940 ntBASIC19.72■□□□□ 0.75
CACNA2D1P54289 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CACNA2D1P54289 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.72■□□□□ 0.75
CACNA2D1P54289 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.72■□□□□ 0.75
CACNA2D1P54289 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.72■□□□□ 0.75
CACNA2D1P54289 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CACNA2D1P54289 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CACNA2D1P54289 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CACNA2D1P54289 AL357033.4-201ENST00000617703 1807 ntBASIC19.72■□□□□ 0.75
CACNA2D1P54289 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA2D1P54289 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA2D1P54289 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 HOMER2P1-201ENST00000455653 964 ntBASIC19.71■□□□□ 0.75
CACNA2D1P54289 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.71■□□□□ 0.75
CACNA2D1P54289 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CACNA2D1P54289 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.71■□□□□ 0.75
CACNA2D1P54289 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA2D1P54289 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA2D1P54289 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.71■□□□□ 0.75
CACNA2D1P54289 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CACNA2D1P54289 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 AC006333.2-201ENST00000607957 2099 ntBASIC19.71■□□□□ 0.75
CACNA2D1P54289 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CACNA2D1P54289 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 HYMAI.1-201ENST00000620949 238 ntBASIC19.7■□□□□ 0.74
CACNA2D1P54289 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CACNA2D1P54289 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CACNA2D1P54289 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CACNA2D1P54289 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA2D1P54289 STARP1-201ENST00000397973 869 ntBASIC19.69■□□□□ 0.74
CACNA2D1P54289 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms