Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 KRASP1-201ENST00000407852 552 ntBASIC19.12■□□□□ 0.65
ITGA8P53708 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.12■□□□□ 0.65
ITGA8P53708 KRT16P5-201ENST00000455284 522 ntBASIC19.12■□□□□ 0.65
ITGA8P53708 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
ITGA8P53708 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.12■□□□□ 0.65
ITGA8P53708 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.12■□□□□ 0.65
ITGA8P53708 AL445675.2-201ENST00000620291 557 ntBASIC19.12■□□□□ 0.65
ITGA8P53708 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ITGA8P53708 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
ITGA8P53708 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
ITGA8P53708 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ITGA8P53708 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA8P53708 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ITGA8P53708 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ITGA8P53708 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ITGA8P53708 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.11■□□□□ 0.65
ITGA8P53708 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ITGA8P53708 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.11■□□□□ 0.65
ITGA8P53708 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ITGA8P53708 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.11■□□□□ 0.65
ITGA8P53708 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ITGA8P53708 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.11■□□□□ 0.65
ITGA8P53708 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.11■□□□□ 0.65
ITGA8P53708 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.11■□□□□ 0.65
ITGA8P53708 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.11■□□□□ 0.65
ITGA8P53708 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.11■□□□□ 0.65
ITGA8P53708 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.11■□□□□ 0.65
ITGA8P53708 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.11■□□□□ 0.65
ITGA8P53708 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ITGA8P53708 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA8P53708 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.11■□□□□ 0.65
ITGA8P53708 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.1■□□□□ 0.65
ITGA8P53708 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA8P53708 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA8P53708 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.1■□□□□ 0.65
ITGA8P53708 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.1■□□□□ 0.65
ITGA8P53708 AC239809.2-201ENST00000415381 517 ntBASIC19.1■□□□□ 0.65
ITGA8P53708 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 AC004980.1-204ENST00000429707 299 ntBASIC19.1■□□□□ 0.65
ITGA8P53708 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.1■□□□□ 0.65
ITGA8P53708 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.1■□□□□ 0.65
ITGA8P53708 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ITGA8P53708 AC131212.4-201ENST00000623606 975 ntBASIC19.1■□□□□ 0.65
ITGA8P53708 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
ITGA8P53708 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ITGA8P53708 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.1■□□□□ 0.65
ITGA8P53708 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA8P53708 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA8P53708 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA8P53708 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.09■□□□□ 0.65
ITGA8P53708 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.09■□□□□ 0.65
ITGA8P53708 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 AC008556.1-201ENST00000610908 2040 ntBASIC19.09■□□□□ 0.65
ITGA8P53708 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
ITGA8P53708 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA8P53708 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.09■□□□□ 0.65
ITGA8P53708 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms