Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.28■□□□□ 0.52
GTF2A1P52655 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.28■□□□□ 0.52
GTF2A1P52655 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.28■□□□□ 0.52
GTF2A1P52655 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GTF2A1P52655 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GTF2A1P52655 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GTF2A1P52655 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.28■□□□□ 0.52
GTF2A1P52655 BX119927.1-201ENST00000636596 1552 ntBASIC18.28■□□□□ 0.52
GTF2A1P52655 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GTF2A1P52655 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
GTF2A1P52655 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GTF2A1P52655 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GTF2A1P52655 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GTF2A1P52655 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GTF2A1P52655 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GTF2A1P52655 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.27■□□□□ 0.52
GTF2A1P52655 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.27■□□□□ 0.52
GTF2A1P52655 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GTF2A1P52655 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.27■□□□□ 0.52
GTF2A1P52655 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.27■□□□□ 0.52
GTF2A1P52655 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GTF2A1P52655 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GTF2A1P52655 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GTF2A1P52655 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.27■□□□□ 0.52
GTF2A1P52655 AC133561.4-201ENST00000566112 224 ntBASIC18.27■□□□□ 0.52
GTF2A1P52655 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.27■□□□□ 0.52
GTF2A1P52655 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.27■□□□□ 0.52
GTF2A1P52655 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
GTF2A1P52655 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
GTF2A1P52655 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GTF2A1P52655 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GTF2A1P52655 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
GTF2A1P52655 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GTF2A1P52655 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GTF2A1P52655 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
GTF2A1P52655 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
GTF2A1P52655 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
GTF2A1P52655 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GTF2A1P52655 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
GTF2A1P52655 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GTF2A1P52655 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
GTF2A1P52655 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GTF2A1P52655 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.26■□□□□ 0.51
GTF2A1P52655 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 AL162741.1-201ENST00000565563 1558 ntBASIC18.26■□□□□ 0.51
GTF2A1P52655 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
GTF2A1P52655 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.26■□□□□ 0.51
GTF2A1P52655 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.26■□□□□ 0.51
GTF2A1P52655 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.26■□□□□ 0.51
GTF2A1P52655 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.26■□□□□ 0.51
GTF2A1P52655 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.26■□□□□ 0.51
GTF2A1P52655 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
GTF2A1P52655 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
GTF2A1P52655 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
GTF2A1P52655 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GTF2A1P52655 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
GTF2A1P52655 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.26■□□□□ 0.51
GTF2A1P52655 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
GTF2A1P52655 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.26■□□□□ 0.51
GTF2A1P52655 AP001094.4-201ENST00000579008 2176 ntBASIC18.25■□□□□ 0.51
GTF2A1P52655 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.25■□□□□ 0.51
GTF2A1P52655 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GTF2A1P52655 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.25■□□□□ 0.51
GTF2A1P52655 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.25■□□□□ 0.51
GTF2A1P52655 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
GTF2A1P52655 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GTF2A1P52655 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.25■□□□□ 0.51
GTF2A1P52655 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GTF2A1P52655 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.25■□□□□ 0.51
GTF2A1P52655 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GTF2A1P52655 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
GTF2A1P52655 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.25■□□□□ 0.51
GTF2A1P52655 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.25■□□□□ 0.51
GTF2A1P52655 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GTF2A1P52655 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GTF2A1P52655 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
GTF2A1P52655 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GTF2A1P52655 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GTF2A1P52655 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.25■□□□□ 0.51
GTF2A1P52655 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.25■□□□□ 0.51
GTF2A1P52655 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
GTF2A1P52655 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GTF2A1P52655 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
GTF2A1P52655 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GTF2A1P52655 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.25■□□□□ 0.51
GTF2A1P52655 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GTF2A1P52655 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms