Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP4P49662 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASP4P49662 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASP4P49662 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CASP4P49662 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CASP4P49662 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CASP4P49662 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP4P49662 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASP4P49662 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASP4P49662 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASP4P49662 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASP4P49662 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASP4P49662 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASP4P49662 KRT8P50-201ENST00000562022 1438 ntBASIC20.28■□□□□ 0.84
CASP4P49662 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASP4P49662 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.28■□□□□ 0.84
CASP4P49662 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CASP4P49662 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CASP4P49662 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CASP4P49662 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.28■□□□□ 0.84
CASP4P49662 AC034236.2-201ENST00000606662 1610 ntBASIC20.28■□□□□ 0.84
CASP4P49662 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CASP4P49662 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASP4P49662 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CASP4P49662 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CASP4P49662 AC211429.1-201ENST00000415277 523 ntBASIC20.28■□□□□ 0.84
CASP4P49662 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CASP4P49662 AC128688.1-201ENST00000487626 519 ntBASIC20.28■□□□□ 0.84
CASP4P49662 WWOX-216ENST00000569818 525 ntBASIC20.28■□□□□ 0.84
CASP4P49662 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.28■□□□□ 0.84
CASP4P49662 AC012306.2-201ENST00000609350 630 ntBASIC20.28■□□□□ 0.84
CASP4P49662 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.28■□□□□ 0.84
CASP4P49662 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CASP4P49662 MYLKP1-201ENST00000509077 1580 ntBASIC20.28■□□□□ 0.84
CASP4P49662 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASP4P49662 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.28■□□□□ 0.84
CASP4P49662 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CASP4P49662 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASP4P49662 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.27■□□□□ 0.84
CASP4P49662 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.27■□□□□ 0.84
CASP4P49662 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.27■□□□□ 0.84
CASP4P49662 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.27■□□□□ 0.84
CASP4P49662 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CASP4P49662 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CASP4P49662 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CASP4P49662 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.27■□□□□ 0.84
CASP4P49662 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.27■□□□□ 0.84
CASP4P49662 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.27■□□□□ 0.84
CASP4P49662 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.27■□□□□ 0.84
CASP4P49662 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CASP4P49662 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASP4P49662 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.27■□□□□ 0.84
CASP4P49662 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CASP4P49662 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.27■□□□□ 0.83
CASP4P49662 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.27■□□□□ 0.83
CASP4P49662 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CASP4P49662 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CASP4P49662 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
CASP4P49662 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.26■□□□□ 0.83
CASP4P49662 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.26■□□□□ 0.83
CASP4P49662 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
CASP4P49662 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.26■□□□□ 0.83
CASP4P49662 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CASP4P49662 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 AC007613.1-201ENST00000572811 2597 ntBASIC20.26■□□□□ 0.83
CASP4P49662 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CASP4P49662 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.26■□□□□ 0.83
CASP4P49662 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.26■□□□□ 0.83
CASP4P49662 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.26■□□□□ 0.83
CASP4P49662 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.26■□□□□ 0.83
CASP4P49662 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.26■□□□□ 0.83
CASP4P49662 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
CASP4P49662 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.26■□□□□ 0.83
CASP4P49662 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP4P49662 KRT18P22-201ENST00000402024 1347 ntBASIC20.26■□□□□ 0.83
CASP4P49662 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.26■□□□□ 0.83
CASP4P49662 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASP4P49662 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASP4P49662 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASP4P49662 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms