Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.21■□□□□ 0.99
TM4SF4P48230 AC002347.1-201ENST00000569543 541 ntBASIC21.21■□□□□ 0.99
TM4SF4P48230 AC025062.2-201ENST00000605477 670 ntBASIC21.21■□□□□ 0.99
TM4SF4P48230 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TM4SF4P48230 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.21■□□□□ 0.99
TM4SF4P48230 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF4P48230 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.21■□□□□ 0.99
TM4SF4P48230 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.21■□□□□ 0.99
TM4SF4P48230 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF4P48230 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF4P48230 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.21■□□□□ 0.99
TM4SF4P48230 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.21■□□□□ 0.99
TM4SF4P48230 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF4P48230 Z82202.1-201ENST00000623446 1880 ntBASIC21.2■□□□□ 0.98
TM4SF4P48230 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF4P48230 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF4P48230 AL356309.3-201ENST00000624132 1934 ntBASIC21.2■□□□□ 0.98
TM4SF4P48230 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.2■□□□□ 0.98
TM4SF4P48230 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF4P48230 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF4P48230 AC211486.1-202ENST00000416371 468 ntBASIC21.2■□□□□ 0.98
TM4SF4P48230 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.2■□□□□ 0.98
TM4SF4P48230 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.2■□□□□ 0.98
TM4SF4P48230 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TM4SF4P48230 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF4P48230 AC211476.1-201ENST00000503899 468 ntBASIC21.2■□□□□ 0.98
TM4SF4P48230 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
TM4SF4P48230 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.2■□□□□ 0.98
TM4SF4P48230 AC011467.2-201ENST00000598425 242 ntBASIC21.2■□□□□ 0.98
TM4SF4P48230 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.2■□□□□ 0.98
TM4SF4P48230 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF4P48230 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF4P48230 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
TM4SF4P48230 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
TM4SF4P48230 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF4P48230 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF4P48230 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.19■□□□□ 0.98
TM4SF4P48230 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF4P48230 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TM4SF4P48230 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF4P48230 HTR5BP-201ENST00000430851 1154 ntBASIC21.19■□□□□ 0.98
TM4SF4P48230 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.19■□□□□ 0.98
TM4SF4P48230 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
TM4SF4P48230 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.19■□□□□ 0.98
TM4SF4P48230 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.19■□□□□ 0.98
TM4SF4P48230 AC105339.3-201ENST00000560043 636 ntBASIC21.19■□□□□ 0.98
TM4SF4P48230 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.19■□□□□ 0.98
TM4SF4P48230 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF4P48230 AL357033.4-201ENST00000617703 1807 ntBASIC21.19■□□□□ 0.98
TM4SF4P48230 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF4P48230 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF4P48230 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF4P48230 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.18■□□□□ 0.98
TM4SF4P48230 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.18■□□□□ 0.98
TM4SF4P48230 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
TM4SF4P48230 AL138831.2-201ENST00000606564 490 ntBASIC21.18■□□□□ 0.98
TM4SF4P48230 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.18■□□□□ 0.98
TM4SF4P48230 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF4P48230 FEM1AP3-201ENST00000403722 1741 ntBASIC21.18■□□□□ 0.98
TM4SF4P48230 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.17■□□□□ 0.98
TM4SF4P48230 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
TM4SF4P48230 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.17■□□□□ 0.98
TM4SF4P48230 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.17■□□□□ 0.98
TM4SF4P48230 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.17■□□□□ 0.98
TM4SF4P48230 CYMP-203ENST00000474680 1263 ntBASIC21.17■□□□□ 0.98
TM4SF4P48230 RFPL4AP1-201ENST00000530883 850 ntBASIC21.17■□□□□ 0.98
TM4SF4P48230 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.17■□□□□ 0.98
TM4SF4P48230 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.17■□□□□ 0.98
TM4SF4P48230 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.17■□□□□ 0.98
TM4SF4P48230 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
TM4SF4P48230 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF4P48230 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TM4SF4P48230 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF4P48230 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TM4SF4P48230 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TM4SF4P48230 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TM4SF4P48230 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF4P48230 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms