Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCLP35914 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCLP35914 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGCLP35914 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLP35914 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLP35914 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLP35914 AC126763.1-201ENST00000552015 2118 ntBASIC18.52■□□□□ 0.56
HMGCLP35914 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGCLP35914 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLP35914 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLP35914 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HMGCLP35914 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLP35914 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGCLP35914 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.52■□□□□ 0.56
HMGCLP35914 COX11P1-201ENST00000489116 835 ntBASIC18.52■□□□□ 0.56
HMGCLP35914 MIR3180-4-201ENST00000582223 153 ntBASIC18.52■□□□□ 0.56
HMGCLP35914 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLP35914 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGCLP35914 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGCLP35914 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCLP35914 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HMGCLP35914 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HMGCLP35914 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HMGCLP35914 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMGCLP35914 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGCLP35914 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGCLP35914 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGCLP35914 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGCLP35914 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMGCLP35914 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HMGCLP35914 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
HMGCLP35914 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.51■□□□□ 0.55
HMGCLP35914 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HMGCLP35914 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.51■□□□□ 0.55
HMGCLP35914 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HMGCLP35914 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.51■□□□□ 0.55
HMGCLP35914 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.51■□□□□ 0.55
HMGCLP35914 SEC1P-202ENST00000473944 940 ntBASIC18.51■□□□□ 0.55
HMGCLP35914 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.51■□□□□ 0.55
HMGCLP35914 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HMGCLP35914 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.51■□□□□ 0.55
HMGCLP35914 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
HMGCLP35914 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCLP35914 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.5■□□□□ 0.55
HMGCLP35914 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HMGCLP35914 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HMGCLP35914 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.5■□□□□ 0.55
HMGCLP35914 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCLP35914 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCLP35914 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCLP35914 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
HMGCLP35914 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 RCN1P1-201ENST00000400413 996 ntBASIC18.5■□□□□ 0.55
HMGCLP35914 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.5■□□□□ 0.55
HMGCLP35914 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.5■□□□□ 0.55
HMGCLP35914 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
HMGCLP35914 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.5■□□□□ 0.55
HMGCLP35914 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.5■□□□□ 0.55
HMGCLP35914 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.5■□□□□ 0.55
HMGCLP35914 AC024243.1-201ENST00000609234 778 ntBASIC18.5■□□□□ 0.55
HMGCLP35914 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HMGCLP35914 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HMGCLP35914 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
HMGCLP35914 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCLP35914 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCLP35914 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCLP35914 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCLP35914 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCLP35914 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCLP35914 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms