Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 ABHD17AP1-201ENST00000358206 933 ntBASIC19.26■□□□□ 0.67
PTPN7P35236 RPS2P55-201ENST00000397318 883 ntBASIC19.26■□□□□ 0.67
PTPN7P35236 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN7P35236 AC107956.1-201ENST00000494359 873 ntBASIC19.26■□□□□ 0.67
PTPN7P35236 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN7P35236 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN7P35236 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
PTPN7P35236 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN7P35236 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN7P35236 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN7P35236 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PTPN7P35236 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN7P35236 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN7P35236 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN7P35236 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN7P35236 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN7P35236 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PTPN7P35236 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN7P35236 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN7P35236 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN7P35236 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTPN7P35236 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTPN7P35236 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN7P35236 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.25■□□□□ 0.67
PTPN7P35236 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN7P35236 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN7P35236 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN7P35236 GCSHP5-201ENST00000443090 522 ntBASIC19.25■□□□□ 0.67
PTPN7P35236 UBE2SP1-201ENST00000450587 669 ntBASIC19.25■□□□□ 0.67
PTPN7P35236 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN7P35236 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN7P35236 AC233702.5-201ENST00000584107 538 ntBASIC19.25■□□□□ 0.67
PTPN7P35236 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PTPN7P35236 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN7P35236 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PTPN7P35236 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN7P35236 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PTPN7P35236 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTPN7P35236 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.24■□□□□ 0.67
PTPN7P35236 AC142381.4-202ENST00000563973 229 ntBASIC19.24■□□□□ 0.67
PTPN7P35236 SLC25A1P4-201ENST00000567977 778 ntBASIC19.24■□□□□ 0.67
PTPN7P35236 AP001412.1-201ENST00000608405 714 ntBASIC19.24■□□□□ 0.67
PTPN7P35236 AC113410.3-201ENST00000623366 203 ntBASIC19.24■□□□□ 0.67
PTPN7P35236 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN7P35236 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 AC034236.2-201ENST00000606662 1610 ntBASIC19.24■□□□□ 0.67
PTPN7P35236 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN7P35236 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN7P35236 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
PTPN7P35236 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN7P35236 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PTPN7P35236 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.23■□□□□ 0.67
PTPN7P35236 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN7P35236 AC097488.1-201ENST00000507834 756 ntBASIC19.23■□□□□ 0.67
PTPN7P35236 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.23■□□□□ 0.67
PTPN7P35236 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN7P35236 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PTPN7P35236 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPN7P35236 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 KRT8P50-201ENST00000562022 1438 ntBASIC19.23■□□□□ 0.67
PTPN7P35236 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PTPN7P35236 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPN7P35236 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPN7P35236 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PTPN7P35236 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms