Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.78■□□□□ 0.6
XPAP23025 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.78■□□□□ 0.6
XPAP23025 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.78■□□□□ 0.6
XPAP23025 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.78■□□□□ 0.6
XPAP23025 AL049812.1-201ENST00000432563 2267 ntBASIC18.78■□□□□ 0.6
XPAP23025 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
XPAP23025 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
XPAP23025 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
XPAP23025 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.78■□□□□ 0.6
XPAP23025 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 AL359075.1-203ENST00000462729 1002 ntBASIC18.78■□□□□ 0.6
XPAP23025 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.78■□□□□ 0.6
XPAP23025 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.78■□□□□ 0.6
XPAP23025 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.78■□□□□ 0.6
XPAP23025 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.78■□□□□ 0.6
XPAP23025 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
XPAP23025 AC024243.1-201ENST00000609234 778 ntBASIC18.78■□□□□ 0.6
XPAP23025 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.78■□□□□ 0.6
XPAP23025 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
XPAP23025 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.78■□□□□ 0.6
XPAP23025 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.78■□□□□ 0.6
XPAP23025 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
XPAP23025 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
XPAP23025 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
XPAP23025 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.77■□□□□ 0.6
XPAP23025 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
XPAP23025 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.77■□□□□ 0.6
XPAP23025 KRT18P23-201ENST00000435622 1283 ntBASIC18.77■□□□□ 0.6
XPAP23025 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.77■□□□□ 0.6
XPAP23025 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.77■□□□□ 0.6
XPAP23025 AC034232.1-201ENST00000506026 1064 ntBASIC18.77■□□□□ 0.6
XPAP23025 GCSHP2-201ENST00000560971 527 ntBASIC18.77■□□□□ 0.6
XPAP23025 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.77■□□□□ 0.6
XPAP23025 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.77■□□□□ 0.6
XPAP23025 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
XPAP23025 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.77■□□□□ 0.6
XPAP23025 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
XPAP23025 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
XPAP23025 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
XPAP23025 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
XPAP23025 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
XPAP23025 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.77■□□□□ 0.59
XPAP23025 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
XPAP23025 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
XPAP23025 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
XPAP23025 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.77■□□□□ 0.59
XPAP23025 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
XPAP23025 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 MIR564-202ENST00000385049 94 ntBASIC18.76■□□□□ 0.59
XPAP23025 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.76■□□□□ 0.59
XPAP23025 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.76■□□□□ 0.59
XPAP23025 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.76■□□□□ 0.59
XPAP23025 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
XPAP23025 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
XPAP23025 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 AC068587.9-201ENST00000641814 219 ntBASIC18.76■□□□□ 0.59
XPAP23025 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.76■□□□□ 0.59
XPAP23025 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XPAP23025 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
XPAP23025 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
XPAP23025 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
XPAP23025 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
XPAP23025 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
XPAP23025 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
XPAP23025 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
XPAP23025 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
XPAP23025 FAM8A6P-201ENST00000407496 1135 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms