Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
CD53P19397 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD53P19397 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD53P19397 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD53P19397 AL162741.1-201ENST00000565563 1558 ntBASIC16.92■□□□□ 0.3
CD53P19397 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.92■□□□□ 0.3
CD53P19397 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CD53P19397 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CD53P19397 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD53P19397 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD53P19397 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD53P19397 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD53P19397 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CD53P19397 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.92■□□□□ 0.3
CD53P19397 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CD53P19397 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.91■□□□□ 0.3
CD53P19397 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.91■□□□□ 0.3
CD53P19397 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.91■□□□□ 0.3
CD53P19397 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.91■□□□□ 0.3
CD53P19397 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CD53P19397 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CD53P19397 ANO7L1-203ENST00000602586 1720 ntBASIC16.91■□□□□ 0.3
CD53P19397 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.91■□□□□ 0.3
CD53P19397 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.91■□□□□ 0.3
CD53P19397 AC087388.1-201ENST00000571370 1112 ntBASIC16.91■□□□□ 0.3
CD53P19397 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.91■□□□□ 0.3
CD53P19397 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.91■□□□□ 0.3
CD53P19397 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD53P19397 SDHAP1-207ENST00000440850 2000 ntBASIC16.91■□□□□ 0.3
CD53P19397 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.91■□□□□ 0.3
CD53P19397 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.9■□□□□ 0.3
CD53P19397 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.9■□□□□ 0.3
CD53P19397 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CD53P19397 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
CD53P19397 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.9■□□□□ 0.3
CD53P19397 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.9■□□□□ 0.3
CD53P19397 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.9■□□□□ 0.3
CD53P19397 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.9■□□□□ 0.3
CD53P19397 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.9■□□□□ 0.3
CD53P19397 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 AC068880.1-201ENST00000507289 2297 ntBASIC16.9■□□□□ 0.3
CD53P19397 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CD53P19397 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.9■□□□□ 0.3
CD53P19397 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD53P19397 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD53P19397 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CD53P19397 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CD53P19397 AC073592.3-201ENST00000625118 1834 ntBASIC16.89■□□□□ 0.29
CD53P19397 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.89■□□□□ 0.29
CD53P19397 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms