Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN1P18031 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PTPN1P18031 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PTPN1P18031 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PTPN1P18031 KRT8P50-201ENST00000562022 1438 ntBASIC19.7■□□□□ 0.74
PTPN1P18031 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PTPN1P18031 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PTPN1P18031 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PTPN1P18031 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPN1P18031 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPN1P18031 HYMAI.1-201ENST00000620949 238 ntBASIC19.7■□□□□ 0.74
PTPN1P18031 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN1P18031 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN1P18031 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN1P18031 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPN1P18031 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
PTPN1P18031 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPN1P18031 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPN1P18031 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.69■□□□□ 0.74
PTPN1P18031 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.69■□□□□ 0.74
PTPN1P18031 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN1P18031 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 AP000974.1-201ENST00000623909 2387 ntBASIC19.69■□□□□ 0.74
PTPN1P18031 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN1P18031 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PTPN1P18031 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTPN1P18031 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN1P18031 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PTPN1P18031 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPN1P18031 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PTPN1P18031 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
PTPN1P18031 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPN1P18031 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPN1P18031 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN1P18031 AC092597.1-201ENST00000487352 616 ntBASIC19.68■□□□□ 0.74
PTPN1P18031 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN1P18031 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTPN1P18031 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTPN1P18031 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN1P18031 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN1P18031 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
PTPN1P18031 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN1P18031 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 AP000593.1-201ENST00000393668 712 ntBASIC19.67■□□□□ 0.74
PTPN1P18031 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.67■□□□□ 0.74
PTPN1P18031 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN1P18031 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.67■□□□□ 0.74
PTPN1P18031 MIR3180-4-201ENST00000582223 153 ntBASIC19.67■□□□□ 0.74
PTPN1P18031 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTPN1P18031 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.67■□□□□ 0.74
PTPN1P18031 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PTPN1P18031 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTPN1P18031 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.67■□□□□ 0.74
PTPN1P18031 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTPN1P18031 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 LINC01311-201ENST00000565162 1445 ntBASIC19.67■□□□□ 0.74
PTPN1P18031 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN1P18031 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms