Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NCK1P16333 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.61■□□□□ 0.41
NCK1P16333 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.61■□□□□ 0.41
NCK1P16333 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.61■□□□□ 0.41
NCK1P16333 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.61■□□□□ 0.41
NCK1P16333 AC008687.6-201ENST00000596318 630 ntBASIC17.61■□□□□ 0.41
NCK1P16333 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NCK1P16333 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.61■□□□□ 0.41
NCK1P16333 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.61■□□□□ 0.41
NCK1P16333 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NCK1P16333 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.61■□□□□ 0.41
NCK1P16333 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 KRT8P41-201ENST00000533985 1514 ntBASIC17.61■□□□□ 0.41
NCK1P16333 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
NCK1P16333 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NCK1P16333 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.61■□□□□ 0.41
NCK1P16333 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NCK1P16333 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.61■□□□□ 0.41
NCK1P16333 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.6■□□□□ 0.41
NCK1P16333 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.6■□□□□ 0.41
NCK1P16333 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.6■□□□□ 0.41
NCK1P16333 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.6■□□□□ 0.41
NCK1P16333 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NCK1P16333 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NCK1P16333 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.6■□□□□ 0.41
NCK1P16333 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.6■□□□□ 0.41
NCK1P16333 AC097658.1-201ENST00000475555 843 ntBASIC17.6■□□□□ 0.41
NCK1P16333 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.6■□□□□ 0.41
NCK1P16333 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NCK1P16333 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
NCK1P16333 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
NCK1P16333 MYC-209ENST00000641252 345 ntBASIC17.6■□□□□ 0.41
NCK1P16333 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NCK1P16333 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NCK1P16333 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.6■□□□□ 0.41
NCK1P16333 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NCK1P16333 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NCK1P16333 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NCK1P16333 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.6■□□□□ 0.41
NCK1P16333 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NCK1P16333 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NCK1P16333 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.59■□□□□ 0.41
NCK1P16333 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.59■□□□□ 0.41
NCK1P16333 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NCK1P16333 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
NCK1P16333 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.59■□□□□ 0.41
NCK1P16333 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCK1P16333 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCK1P16333 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.59■□□□□ 0.41
NCK1P16333 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCK1P16333 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
NCK1P16333 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCK1P16333 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCK1P16333 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.59■□□□□ 0.41
NCK1P16333 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.59■□□□□ 0.41
NCK1P16333 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.59■□□□□ 0.41
NCK1P16333 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.59■□□□□ 0.41
NCK1P16333 MIR5787-201ENST00000611784 55 ntBASIC17.59■□□□□ 0.41
NCK1P16333 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCK1P16333 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCK1P16333 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NCK1P16333 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NCK1P16333 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NCK1P16333 REXO1L9P-201ENST00000604264 2108 ntBASIC17.59■□□□□ 0.41
NCK1P16333 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NCK1P16333 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.59■□□□□ 0.41
NCK1P16333 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCK1P16333 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
NCK1P16333 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.58■□□□□ 0.41
NCK1P16333 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.58■□□□□ 0.41
NCK1P16333 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NCK1P16333 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCK1P16333 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
NCK1P16333 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCK1P16333 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NCK1P16333 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.58■□□□□ 0.41
NCK1P16333 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.58■□□□□ 0.41
NCK1P16333 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms