Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCF4P15884 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
TCF4P15884 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCF4P15884 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCF4P15884 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCF4P15884 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCF4P15884 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCF4P15884 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCF4P15884 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCF4P15884 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCF4P15884 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.42■□□□□ 0.7
TCF4P15884 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TCF4P15884 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.42■□□□□ 0.7
TCF4P15884 AL133373.2-201ENST00000623187 2828 ntBASIC19.42■□□□□ 0.7
TCF4P15884 AC036111.1-201ENST00000533973 1582 ntBASIC19.42■□□□□ 0.7
TCF4P15884 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 MIR564-202ENST00000385049 94 ntBASIC19.42■□□□□ 0.7
TCF4P15884 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.42■□□□□ 0.7
TCF4P15884 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TCF4P15884 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.42■□□□□ 0.7
TCF4P15884 AP003041.3-201ENST00000527151 707 ntBASIC19.42■□□□□ 0.7
TCF4P15884 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TCF4P15884 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.42■□□□□ 0.7
TCF4P15884 MIR4497-201ENST00000583208 89 ntBASIC19.42■□□□□ 0.7
TCF4P15884 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.42■□□□□ 0.7
TCF4P15884 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TCF4P15884 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.42■□□□□ 0.7
TCF4P15884 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCF4P15884 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
TCF4P15884 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.41■□□□□ 0.7
TCF4P15884 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.41■□□□□ 0.7
TCF4P15884 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.41■□□□□ 0.7
TCF4P15884 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TCF4P15884 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
TCF4P15884 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.41■□□□□ 0.7
TCF4P15884 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.41■□□□□ 0.7
TCF4P15884 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.41■□□□□ 0.7
TCF4P15884 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.41■□□□□ 0.7
TCF4P15884 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.41■□□□□ 0.7
TCF4P15884 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCF4P15884 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.41■□□□□ 0.7
TCF4P15884 CYP2D8P-201ENST00000433633 1490 ntBASIC19.41■□□□□ 0.7
TCF4P15884 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TCF4P15884 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TCF4P15884 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.4■□□□□ 0.7
TCF4P15884 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TCF4P15884 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.4■□□□□ 0.7
TCF4P15884 AC135776.1-201ENST00000319817 2481 ntBASIC19.4■□□□□ 0.7
TCF4P15884 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.4■□□□□ 0.7
TCF4P15884 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.4■□□□□ 0.7
TCF4P15884 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.4■□□□□ 0.7
TCF4P15884 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.4■□□□□ 0.7
TCF4P15884 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.4■□□□□ 0.7
TCF4P15884 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TCF4P15884 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.4■□□□□ 0.7
TCF4P15884 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 AC112777.1-201ENST00000540175 1423 ntBASIC19.4■□□□□ 0.7
TCF4P15884 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.4■□□□□ 0.7
TCF4P15884 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCF4P15884 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TCF4P15884 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TCF4P15884 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms