Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 KRT17P3-201ENST00000420566 1262 ntBASIC20.56■□□□□ 0.88
ATP1A3P13637 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP1A3P13637 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
ATP1A3P13637 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.56■□□□□ 0.88
ATP1A3P13637 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP1A3P13637 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.56■□□□□ 0.88
ATP1A3P13637 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ATP1A3P13637 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATP1A3P13637 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP1A3P13637 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP1A3P13637 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP1A3P13637 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 ID1-201ENST00000376105 1233 ntBASIC20.55■□□□□ 0.88
ATP1A3P13637 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP1A3P13637 AC239809.2-201ENST00000415381 517 ntBASIC20.55■□□□□ 0.88
ATP1A3P13637 HLA-L-209ENST00000420110 1011 ntBASIC20.55■□□□□ 0.88
ATP1A3P13637 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP1A3P13637 AC091390.4-202ENST00000476426 537 ntBASIC20.55■□□□□ 0.88
ATP1A3P13637 AC026366.1-201ENST00000488803 879 ntBASIC20.55■□□□□ 0.88
ATP1A3P13637 PRSS44-201ENST00000515154 1146 ntBASIC20.55■□□□□ 0.88
ATP1A3P13637 RNA5SP413-201ENST00000516373 109 ntBASIC20.55■□□□□ 0.88
ATP1A3P13637 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
ATP1A3P13637 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP1A3P13637 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ATP1A3P13637 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP1A3P13637 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP1A3P13637 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
ATP1A3P13637 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ATP1A3P13637 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP1A3P13637 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
ATP1A3P13637 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATP1A3P13637 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP1A3P13637 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP1A3P13637 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 RCC2P3-201ENST00000418112 1537 ntBASIC20.54■□□□□ 0.88
ATP1A3P13637 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP1A3P13637 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP1A3P13637 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP1A3P13637 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
ATP1A3P13637 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP1A3P13637 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.54■□□□□ 0.88
ATP1A3P13637 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP1A3P13637 AC138028.4-201ENST00000564984 1845 ntBASIC20.54■□□□□ 0.88
ATP1A3P13637 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP1A3P13637 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP1A3P13637 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP1A3P13637 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP1A3P13637 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP1A3P13637 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP1A3P13637 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ATP1A3P13637 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP1A3P13637 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ATP1A3P13637 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP1A3P13637 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP1A3P13637 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP1A3P13637 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
ATP1A3P13637 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP1A3P13637 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP1A3P13637 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.53■□□□□ 0.88
ATP1A3P13637 MYC-208ENST00000641036 567 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms