Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL4P13236 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL4P13236 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL4P13236 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.56■□□□□ 0.4
CCL4P13236 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.56■□□□□ 0.4
CCL4P13236 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.56■□□□□ 0.4
CCL4P13236 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.56■□□□□ 0.4
CCL4P13236 AL160237.2-201ENST00000556165 472 ntBASIC17.56■□□□□ 0.4
CCL4P13236 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.56■□□□□ 0.4
CCL4P13236 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.56■□□□□ 0.4
CCL4P13236 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.56■□□□□ 0.4
CCL4P13236 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL4P13236 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL4P13236 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL4P13236 AL032819.2-201ENST00000624543 2162 ntBASIC17.56■□□□□ 0.4
CCL4P13236 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCL4P13236 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCL4P13236 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.55■□□□□ 0.4
CCL4P13236 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCL4P13236 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.55■□□□□ 0.4
CCL4P13236 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.55■□□□□ 0.4
CCL4P13236 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 RN7SL606P-201ENST00000472779 293 ntBASIC17.55■□□□□ 0.4
CCL4P13236 GUSBP12-201ENST00000513727 720 ntBASIC17.55■□□□□ 0.4
CCL4P13236 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.55■□□□□ 0.4
CCL4P13236 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CCL4P13236 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCL4P13236 Z69720.1-201ENST00000601483 472 ntBASIC17.55■□□□□ 0.4
CCL4P13236 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.55■□□□□ 0.4
CCL4P13236 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.55■□□□□ 0.4
CCL4P13236 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.55■□□□□ 0.4
CCL4P13236 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCL4P13236 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCL4P13236 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CCL4P13236 KRT8P50-201ENST00000562022 1438 ntBASIC17.55■□□□□ 0.4
CCL4P13236 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCL4P13236 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.55■□□□□ 0.4
CCL4P13236 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.54■□□□□ 0.4
CCL4P13236 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCL4P13236 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCL4P13236 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCL4P13236 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.54■□□□□ 0.4
CCL4P13236 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.54■□□□□ 0.4
CCL4P13236 IGHV3-47-201ENST00000425060 335 ntBASIC17.54■□□□□ 0.4
CCL4P13236 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.54■□□□□ 0.4
CCL4P13236 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.54■□□□□ 0.4
CCL4P13236 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.54■□□□□ 0.4
CCL4P13236 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCL4P13236 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.54■□□□□ 0.4
CCL4P13236 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.54■□□□□ 0.4
CCL4P13236 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.54■□□□□ 0.4
CCL4P13236 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.54■□□□□ 0.4
CCL4P13236 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CCL4P13236 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCL4P13236 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCL4P13236 AL353692.3-201ENST00000407031 1396 ntBASIC17.53■□□□□ 0.4
CCL4P13236 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCL4P13236 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCL4P13236 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.53■□□□□ 0.4
CCL4P13236 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.53■□□□□ 0.4
CCL4P13236 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCL4P13236 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.53■□□□□ 0.4
CCL4P13236 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.53■□□□□ 0.4
CCL4P13236 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCL4P13236 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCL4P13236 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCL4P13236 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
CCL4P13236 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.53■□□□□ 0.4
CCL4P13236 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.53■□□□□ 0.4
CCL4P13236 AC091607.1-201ENST00000490318 1060 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms